DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and evx1

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_002933430.2 Gene:evx1 / 100496893 XenbaseID:XB-GENE-483664 Length:491 Species:Xenopus tropicalis


Alignment Length:379 Identity:89/379 - (23%)
Similarity:134/379 - (35%) Gaps:83/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 HLGQSPHSPVSSSSPF--QQHHPQVQQQHLNHQQQQH------LHHQQQQHHHQYSSLS---AAL 159
            |:....|.|::.:|||  :.....:....:|..:|..      :.....:...|:.||.   |..
 Frog    14 HVAHQYHKPLAPASPFILKVADVAIYPAAINEWRQCESNDDCTIRDDSLERRGQWCSLPEPVAHR 78

  Fly   160 QLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGN------SQAGDSSCSPSPSASGSSSLHRS 218
            ..:.||.|.......::|..|.....:.|.....|:      :...|:..||.|...........
 Frog    79 AAEAQQGHPLSAHLHSLAMEGRKEMLVFLEGGQLGSLVGKRMAHLSDAVGSPMPEPQDKLVPRSC 143

  Fly   219 LNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTG 283
            |   ||.:...:.......|...|..|.....|.|.|:..|..:|     |:....||.      
 Frog   144 L---SPRAGPIAPRDRPEGSDVEATQANGQQGSRSPALRISSPHP-----PALSDSLSA------ 194

  Fly   284 LEDKSCSRYTDTVMNSYQSMSVPA-----SASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNA 343
               |.....:||..:.|:.:.|..     ||::.:.|..|..:|                   ..
 Frog   195 ---KGQHSSSDTESDFYEEIEVSCTPECNSAASDYQQQQQQHSA-------------------GQ 237

  Fly   344 CTQPASG--VMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYT 406
            |::|..|  :.......||.|    |.                   |..:...|...||.|..:|
 Frog   238 CSEPMGGSPINGSDSSKGGVG----PH-------------------GSLSSCAGDQMRRYRTAFT 279

  Fly   407 RFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAV 460
            |.|...|||||:..:|::|.||.|:|.||.|.|..||:||||||||.|::..|:
 Frog   280 REQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAM 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 29/51 (57%)
Abdominal-A 456..478 CDD:289192 1/5 (20%)
evx1XP_002933430.2 Homeobox 275..328 CDD:365835 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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