Protein Alignment abd-A and nkx1-1

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_002936812.1
• Gene: nkx1-1 / 100493120
• XenbaseID: XB-GENE-488879
• Length: 408
• Species: Xenopus tropicalis
• Alignment Length: 461
• Identity: 94/461 - (20%)
• Similarity: 133/461 - (28%)
• Gaps: 169/461 - (36%)

  Fly   155 LSAALQLQQQQHHISKLAAAAVAS------HG-----HAHQQLLLTP-PSAG------------N 195
            ::|..:..|....|....||.|..      ||     |..|:|..:. |:.|            |
 Frog     1 MNATREKVQLDMPIGGAQAAGVVEAVTCGLHGEMMDSHGEQRLTASDLPAYGCPRDRQGDHPNCN 65

  Fly   196 SQAGDSSCSPSPSASGSSSLHRS--------LNDNS--------------PGSASASASASAASS 238
            :.||..|...:|.|     :||:        |:.|.              ||.........|...
 Frog    66 APAGPESLGAAPLA-----VHRTTSFSVLDILDPNKFNSKQRHCSGAYKPPGDYILRGEEKAEGP 125

  Fly   239 VAAAAAAA-----AAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMN 298
            ..|....|     .:...|:..|....:|.:.:.........|...| :.||::......:.:.:
 Frog   126 DIATGQKAFLEEYESCKKSTEVIKEEGLYQHSATEDCQTQEFSPSPG-SDLEEEEDEEEDEEICS 189

  Fly   299 SYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGI 363
            ...|.|.|                  |.::....||      ||...:.|...     ||.....
 Frog   190 EESSNSTP------------------SGLAERDPGA------GNGQGEDALNT-----GAPAGSN 225

  Fly   364 ADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRR 428
            ...|........:..|.|..:....|  ..:|.| ||.|..:|..|.:.||.:|....||:...|
 Frog   226 QQQPTGKNQQQQNQHGKPKRKRTGSD--SKSGKP-RRARTAFTYEQLVALENKFKSTRYLSVCER 287

  Fly   429 IEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQ 493
            :.:|.:|.|||.|:||||||||.|.||:
 Frog   288 LNLALSLSLTETQVKIWFQNRRTKWKKQ------------------------------------- 315

  Fly   494 QQQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGP 558
                                             |||....:..|          |.|.|.||.|.
 Frog   316 ---------------------------------NPGADTSAPTG----------GSGHGGGGSGS 337

  Fly   559 GIGGGL 564
            .:||||
 Frog   338 VLGGGL 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	26/55 (47%)
		Abdominal-A	456..478	CDD:403567	0/21 (0%)
nkx1-1	XP_002936812.1	Homeodomain	258..314	CDD:459649	26/55 (47%)