Protein Alignment abd-A and trhr3

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_002933212.1
• Gene: trhr3 / 100489565
• XenbaseID: XB-GENE-6492473
• Length: 404
• Species: Xenopus tropicalis
• Alignment Length: 65
• Identity: 14/65 - (21%)
• Similarity: 25/65 - (38%)
• Gaps: 20/65 - (30%)

  Fly     1 MSKFVFDSMLPKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNT 65
            :::.:|.:.||..||....:||.|. ..|.|                   |:..|...|.|::::
 Frog   221 IARILFMNPLPSNPQDLSRMSSKHY-GKPYN-------------------SIKLSGKGNKNTASS 265

  Fly    66  65
             Frog   266  265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475
		Abdominal-A	456..478	CDD:289192
trhr3	XP_002933212.1	7tmA_TRH-R	34..336	CDD:320126	14/65 (22%)
		TM helix 1	35..61	CDD:320126
		TM helix 2	68..93	CDD:320126
		TM helix 3	105..135	CDD:320126
		TM helix 4	148..169	CDD:320126
		TM helix 5	195..224	CDD:320126	0/2 (0%)
		TM helix 6	264..294	CDD:320126	0/2 (0%)
		TM helix 7	304..329	CDD:320126

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000