DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and tmprss9

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_002940084.3 Gene:tmprss9 / 100489279 XenbaseID:XB-GENE-993973 Length:1151 Species:Xenopus tropicalis


Alignment Length:129 Identity:24/129 - (18%)
Similarity:46/129 - (35%) Gaps:35/129 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFVFDSMLP---------KYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASS 56
            :..::.|::.|         ..|:..|.    .::||.|::...|                    
 Frog   770 LKDWILDTVAPVLRTTDSGMNLPRSSPL----PISTTRPSTFQPA-------------------- 810

  Fly    57 SSNNNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLS-QHLGQSPHSPVSSSS 119
            :||...:.|:.....|.|.::.|:|.|::...|. ..:....||:.|. ....:|...||..|:
 Frog   811 TSNGRRTTTLTRPTMSQTKSTRSTPRSTTKYTSK-RTTTAKTSPTALRITEPARSTQRPVPCSA 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475
Abdominal-A 456..478 CDD:289192
tmprss9XP_002940084.3 SEA 60..156 CDD:396113
LDLa 186..221 CDD:238060
Tryp_SPc 234..463 CDD:214473
Tryp_SPc 547..774 CDD:238113 0/3 (0%)
LDLa 871..906 CDD:238060 1/3 (33%)
Tryp_SPc 919..1145 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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