Protein Alignment abd-A and hoxc13

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_002936691.1
• Gene: hoxc13 / 100487255
• XenbaseID: XB-GENE-478832
• Length: 306
• Species: Xenopus tropicalis
• Alignment Length: 337
• Identity: 84/337 - (24%)
• Similarity: 119/337 - (35%)
• Gaps: 99/337 - (29%)

  Fly   179 HGHAHQQLLL---TPPSAGNSQAGDSSCSPSPSASGSSS-----------LHRSLNDNSP--GSA 227
            |.|....|:.   |.|:..|.:       .||:..|.|.           .|.:|..:|.  ||.
 Frog     8 HPHWADTLMYVYETSPNEKNPR-------KSPAMEGLSGNCASSHCRDFISHPALGRHSSAIGSH 65

  Fly   228 SASASASAASSVAA---AAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSC 289
            .........|..||   .|..:::.||..:|.|....| |......||.        ..|..|.|
 Frog    66 QGPVYTDITSPEAARQCTAPPSSSNASLGYAYPFGSSY-YGCRLSQSHN--------VNLHQKPC 121

  Fly   290 SRYTDTVMNSYQSMSVP------ASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPA 348
            |.:.   ...|...|.|      :|.:.:|| ||....::..||    .|.:.:..:....:.|.
 Frog   122 SYHP---AEKYPEPSNPLPSEEFSSRAKEFA-FYPSFASSYQAV----PGYLDMSVVPGISSHPE 178

  Fly   349 SGVMPGAGGAGGAGIADLPRYP----------WMTLTDWMG----------------SPFERVVC 387
                              ||:.          |.....|.|                :||..||.
 Frog   179 ------------------PRHDTLLSMEGYQHWALPNGWDGQVYCSKDQSQSGHLWKAPFPDVVP 225

  Fly   388 GDFNGPNGCPRRRGRQ---TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 449
            ..   |.....||||:   .||:.|..|||||:..:.::|:.:|..|:.|..|:|||:.||||||
 Frog   226 LQ---PEVSNYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISTATSLSERQVTIWFQNR 287

  Fly   450 RMKLKKELRAVK 461
            |:|.||.:...|
 Frog   288 RVKEKKVVTKCK 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	28/58 (48%)
		Abdominal-A	456..478	CDD:403567	1/6 (17%)
hoxc13	XP_002936691.1	HoxA13_N	31..144	CDD:463521	28/124 (23%)
		Homeodomain	237..293	CDD:459649	25/55 (45%)