Protein Alignment abd-A and hoxc13

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_002936691.1
• Gene: hoxc13 / 100487255
• XenbaseID: XB-GENE-478832
• Length: 306
• Species: Xenopus tropicalis
• Alignment Length: 337
• Identity: 84/337 - (24%)
• Similarity: 119/337 - (35%)
• Gaps: 99/337 - (29%)

  Fly   179 HGHAHQQLLL---TPPSAGNSQAGDSSCSPSPSASGSSS-----------LHRSLNDNSP--GSA 227
            |.|....|:.   |.|:..|.:       .||:..|.|.           .|.:|..:|.  ||.
 Frog     8 HPHWADTLMYVYETSPNEKNPR-------KSPAMEGLSGNCASSHCRDFISHPALGRHSSAIGSH 65

  Fly   228 SASASASAASSVAA---AAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSC 289
            .........|..||   .|..:::.||..:|.|....| |......||.        ..|..|.|
 Frog    66 QGPVYTDITSPEAARQCTAPPSSSNASLGYAYPFGSSY-YGCRLSQSHN--------VNLHQKPC 121

  Fly   290 SRYTDTVMNSYQSMSVP------ASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPA 348
            |.:.   ...|...|.|      :|.:.:|| ||....::..||    .|.:.:..:....:.|.
 Frog   122 SYHP---AEKYPEPSNPLPSEEFSSRAKEFA-FYPSFASSYQAV----PGYLDMSVVPGISSHPE 178

  Fly   349 SGVMPGAGGAGGAGIADLPRYP----------WMTLTDWMG----------------SPFERVVC 387
                              ||:.          |.....|.|                :||..||.
 Frog   179 ------------------PRHDTLLSMEGYQHWALPNGWDGQVYCSKDQSQSGHLWKAPFPDVVP 225

  Fly   388 GDFNGPNGCPRRRGRQ---TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 449
            ..   |.....||||:   .||:.|..|||||:..:.::|:.:|..|:.|..|:|||:.||||||
 Frog   226 LQ---PEVSNYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISTATSLSERQVTIWFQNR 287

  Fly   450 RMKLKKELRAVK 461
            |:|.||.:...|
 Frog   288 RVKEKKVVTKCK 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	25/54 (46%)
		Abdominal-A	456..478	CDD:289192	1/6 (17%)
hoxc13	XP_002936691.1	HoxA13_N	31..142	CDD:372013	28/122 (23%)
		Homeobox	239..293	CDD:365835	24/53 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910