Protein Alignment abd-A and Hoxb2

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_002727852.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 274
• Identity: 76/274 - (27%)
• Similarity: 100/274 - (36%)
• Gaps: 113/274 - (41%)

  Fly   184 QQLLLTPPSAGNSQAGDSSCSPSPSAS-GSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAA 247
            :..|:.||.....|.       .||.. |:|:|.|      |||...:....|.........|
  Rat    39 ESTLIPPPPPPLEQT-------FPSLQLGASTLQR------PGSQKPAGDGPALRPPPPLPVA-- 88

  Fly   248 AAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQ 312
                     |.:..:|::.                  |.||..:.:       ||.:.|
  Rat    89 ---------PPAPEFPWMK------------------EKKSAKKPS-------QSAATP------ 113

  Fly   313 FAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDW 377
                    :.|||:|.|:..|:            |:.|  ||...:||:|
  Rat   114 --------SPAASSVRASGVGS------------PSDG--PGLPESGGSG--------------- 141

  Fly   378 MGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 442
                                .||.|..||..|.||||||||||.||.|.||:|||..|.|||||:
  Rat   142 --------------------SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186

  Fly   443 KIWFQNRRMKLKKE 456
            |:||||||||.|::
  Rat   187 KVWFQNRRMKHKRQ 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	37/51 (73%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)
Hoxb2	XP_002727852.1	Homeobox	146..198	CDD:278475	37/51 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810