DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment abd-A and hoxc3

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	XP_002936696.1	Gene:	hoxc3 / 100190990	XenbaseID:	XB-GENE-5997986	Length:	394	Species:	Xenopus tropicalis

Alignment Length:	214	Identity:	68/214 - (31%)
Similarity:	90/214 - (42%)	Gaps:	47/214 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   254 FAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMS---VPASASAQFAQ 315
            |.:|     |..:|..:||.|...:.|.    |...|..::.........|   :|.|||.|
Frog    44 FCLP-----PDTANGSASHKGEHSIKGI----DFHLSEVSEQAQQPKSPNSDSPLPKSASTQ--- 96

  Fly   316 FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR--YPWMTLTDWM 378
                     |..|..|.|.:..|.           ..|.....|    :::|:  :|||..|...
Frog    97 ---------SCTSKKSTGPVSSDV-----------TSPNKKSKG----SNMPKQIFPWMKETRQN 137

  Fly   379 GSPFERVVCGDFNGPN------GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 437
            ....::......:.|.      ....:|.|..||..|.:|||||||||.||.|.||:|:|..|.|
Frog   138 SKQKKQAPPPADDAPAVDSSFLSSASKRARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNL 202

  Fly   438 TERQIKIWFQNRRMKLKKE 456
            :||||||||||||||.||:
Frog   203 SERQIKIWFQNRRMKFKKD 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	36/51 (71%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	0/1 (0%)
hoxc3	XP_002936696.1	Homeobox	167..220	CDD:395001	36/52 (69%)
hoxc3	XP_002936696.1	DUF4074	335..392	CDD:404218
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910