DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and ventx1.1

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001107707.1 Gene:ventx1.1 / 100101668 XenbaseID:XB-GENE-920501 Length:277 Species:Xenopus tropicalis


Alignment Length:86 Identity:32/86 - (37%)
Similarity:45/86 - (52%) Gaps:12/86 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 437
            |.||..|           ..|....:||.|..:|. |...||:.|:...||....|.::|.:|.|
 Frog   117 TETDCRG-----------KSPKSDLQRRLRTAFTP-QISRLEQAFNKQRYLGASERKKLATSLRL 169

  Fly   438 TERQIKIWFQNRRMKLKKELR 458
            :|.|:|.||||||||||::::
 Frog   170 SEIQVKTWFQNRRMKLKRQIQ 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 23/51 (45%)
Abdominal-A 456..478 CDD:289192 0/3 (0%)
ventx1.1NP_001107707.1 Homeobox 135..186 CDD:278475 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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