DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment abd-A and Rhox2e

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_001078817.1	Gene:	Rhox2e / 100040016	MGIID:	3770272	Length:	191	Species:	Mus musculus

Alignment Length:	196	Identity:	48/196 - (24%)
Similarity:	78/196 - (39%)	Gaps:	43/196 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   285 EDKSCSRYTDTVM--------NSYQS-MSVPASASAQFAQFYQHATAAASAVSAASA-------- 332
            ||:..:....|:|        |..:| ..:|.| .|..|:.|:....:|...:|..|
Mouse    16 EDEENANGVKTLMVLLAGEGRNEGESGRGLPGS-GASAAEGYRAGEISAGGPAAPVADLMDNSNQ 79

  Fly   333 ---GAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRY--PWMTLTDWMGSPFERVVCGDFNG 392
               ||.|.|.  ....||...|....|     .:.::.|.  ||.|:     :|. ||:..:|
Mouse    80 EDLGATGCDQ--EKEKQPEEPVPDSMG-----DLENVKRVSGPWSTV-----NPV-RVLVPEF-- 129

  Fly   393 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 457
                 |...:|::...|..|||..|..|||::.:....:|.::.::|..::.||..||.|.:...
Mouse   130 -----RHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYK 189

  Fly   458 R 458
            |
Mouse   190 R 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	16/51 (31%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	1/3 (33%)
Rhox2e	NP_001078817.1	homeodomain	134..186	CDD:238039	16/51 (31%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910