Protein Alignment abd-A and not

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001164669.1
• Gene: not / 100038059
• XenbaseID: XB-GENE-478518
• Length: 236
• Species: Xenopus tropicalis
• Alignment Length: 218
• Identity: 54/218 - (24%)
• Similarity: 77/218 - (35%)
• Gaps: 60/218 - (27%)

  Fly   310 SAQFAQFYQH-----ATAAASAVSAASAGAIGVDSLGNACTQPASGVM-----------PGAGGA 358
            |..|..|..|     |.:.:|.:......:..:||:.:...:|...|.           |.....
 Frog     4 SPVFPAFGHHLAEHPAMSISSELPRTPKASFNIDSILSRADRPVPKVSMEMPSWQPPSPPSVPYR 68

  Fly   359 GGAGIADLP---------RYPWMTLTDWMGSPFERVVCGD----------FNGPNG--------- 395
            ...|:...|         .||.|.....|..|.....|.|          .:.|||
 Frog    69 YSYGMMPYPPVWLIKPTVGYPSMAQQQPMRMPRGECPCPDPACKERGLLYSHCPNGSMNPLSWRT 133

  Fly   396 --CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 458
              |..:|.|..:|..|...|||||....|:....|:::|..|.|||.|:|:||||||:|.:|:
 Frog   134 GPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQ-- 196

  Fly   459 AVKEINEQARRDREEQEKMKAQE 481
                        ..||:|.|..:
 Frog   197 ------------SLEQKKAKLSQ 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	25/55 (45%)
		Abdominal-A	456..478	CDD:403567	3/21 (14%)
not	NP_001164669.1	Homeodomain	139..195	CDD:459649	25/55 (45%)