Protein Alignment abd-A and cdx1b

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001092232.1
• Gene: cdx1b / 100004956
• ZFINID: ZDB-GENE-070615-29
• Length: 255
• Species: Danio rerio
• Alignment Length: 218
• Identity: 65/218 - (29%)
• Similarity: 87/218 - (39%)
• Gaps: 66/218 - (30%)

  Fly   284 LEDKSCSRYTDTV----MNSYQSMSVPASASAQFAQF--YQHAT--------------------- 321
            |.||..|.|.::|    :|......||  |..|:..|  |.|..
Zfish     6 LLDKDSSMYPNSVRHPSLNLNPQNFVP--APPQYPDFTGYHHVPGITTNDPHHSQTGSWNPAYPP 68

  Fly   322 --------AAASAVSAASAGAIGVDS-----------LGNACTQPASGVMPGAGGAGGAGIADLP 367
                    ...|.||::|.|.:|...           |.::.......:.|.|          ..
Zfish    69 PREEWTPYGPGSGVSSSSTGQLGFSPPEFSSVQTPGLLQSSINSSVGQLSPNA----------QR 123

  Fly   368 RYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
            |.|:    |||    .|.|....:|.....:.:.|..||..|.||||||||::.|:|.||:.|:|
Zfish   124 RNPY----DWM----RRSVPPASSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA 180

  Fly   433 HALCLTERQIKIWFQNRRMKLKK 455
            .||.|:|||:||||||||.|.:|
Zfish   181 TALSLSERQVKIWFQNRRAKERK 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	33/51 (65%)
		Abdominal-A	456..478	CDD:289192	65/218 (30%)
cdx1b	NP_001092232.1	Caudal_act	13..132	CDD:282574	24/138 (17%)
		Homeobox	150..202	CDD:278475	33/51 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910