DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and MSS1

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:492 Identity:117/492 - (23%)
Similarity:198/492 - (40%) Gaps:102/492 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GSFFFGIAVGWSG--TAERSVMEQH-------------------SYSFQPTELQWSGVCILLTLG 104
            |...||..||.||  |:....:|:.                   .|..|..:|..|.: .|..|.
plant    33 GGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSSL-YLAGLT 96

  Fly   105 AALWCLPMGLMVRLLGCRRTILIQLLPNFLGWFLTVFARSVPMLYAGRFFLGMCG-GAHCVVVPI 168
            |..:.   ....|.||.|.|:||..:...:|..|...|:.:.||.|||..|| || |.....||:
plant    97 ATFFA---SYTTRTLGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLG-CGVGFANQAVPL 157

  Fly   169 YNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLELRIINFVNLG------------------ 215
            :.:||:.|:.||.:.::|:.....|::::            |.||.|                  
plant   158 FLSEIAPTRIRGGLNILFQLNVTIGILFA------------NLVNYGTAKIKGGWGWRLSLGLAG 210

  Fly   216 ----LLALGPLQILMPESPAYYVDHGNIPRAEDSLRFLRGQKYDTRREIDFLTRDPTESEREVRQ 276
                ||.:|.|  |:.|:|...|:.|.:...:..||.:||.........|.|  :.:...:||:.
plant   211 IPALLLTVGAL--LVTETPNSLVERGRLDEGKAVLRRIRGTDNVEPEFADLL--EASRLAKEVKH 271

  Fly   277 GPLLGFKYKKVRRSLARSLAIALLQKLCGALIFIFYGLNMLDCLRIRREFGLILCLGL----ILG 337
             |......::.|..|..::|:.:.|:..|....:||...:...|....:..|...:..    :|.
plant   272 -PFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTGAVNVLS 335

  Fly   338 FLACFFLVDRLGRRPLLIFSSAGI------VFVSIYLGLHFKVW-----MTMGLTVMSWIALFCI 391
            .|...:.||::|||.||:  .||:      |.::|.||:  ||.     ::.|..:   :.:..|
plant   336 TLVSIYSVDKVGRRVLLL--EAGVQMFFSQVVIAIILGV--KVTDTSTNLSKGFAI---LVVVMI 393

  Fly   392 AIFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSIVCAFNWLTAFFV-------ICWFGSHGVKCQ 449
            ..:|..:....|.|.|::.:|......|..|.|:....|.|..|.:       :|.| ..|:   
plant   394 CTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHF-KFGI--- 454

  Fly   450 PYLFLLFAIIASLILLFSLIYIPETKKLSSAKIQQRL 486
               |:.|:....::.:|.:..:||||.:...::.:|:
plant   455 ---FIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 116/488 (24%)
MFS 63..>226 CDD:119392 52/206 (25%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 112/477 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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