DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and AT3G20460

DIOPT Version :10

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_188681.1 Gene:AT3G20460 / 821591 AraportID:AT3G20460 Length:488 Species:Arabidopsis thaliana


Alignment Length:499 Identity:121/499 - (24%)
Similarity:219/499 - (43%) Gaps:77/499 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ERHVERAPVRQK--------------INNVG---------LYKATLYSNIGSFFFGIAVGWSGTA 75
            :..:|..|:.||              :||.|         |...|..:..|:|.:|.|.|::..|
plant    13 QEDIESVPLLQKVKIQEDIESVKGIRVNNDGEEDGPVTLILLFTTFTALCGTFSYGTAAGFTSPA 77

  Fly    76 ERSVMEQHSYSFQPTELQWSGVCILLTLGAALWCLPMGLMVRLLGCRRTILIQLLPNFLGWFLTV 140
            :..:|...:.|.  .|..:.|.  :||:|..:.....|.:..:.|.|..:.:.......||.:..
plant    78 QTGIMAGLNLSL--AEFSFFGA--VLTIGGLVGAAMSGKLADVFGRRGALGVSNSFCMAGWLMIA 138

  Fly   141 FARSVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLE 205
            |:::...|..||.|||:..|....|||:|..||:..|.||....: ....:|.   |.|::..|.
plant   139 FSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFSAI-NSLVMCA---SVAVTYLLG 199

  Fly   206 LRIINFVNLGLLALGPL------QILMPESPAYYVDHGNIPRAEDSLRFLRGQKYDTRREIDFLT 264
             .:|::..|.|::..|.      ...:||||.:...:|.:..:|.||:.|||...|..:|...:.
plant   200 -SVISWQKLALISTVPCVFEFVGLFFIPESPRWLSRNGRVKESEVSLQRLRGNNTDITKEAAEIK 263

  Fly   265 R--DPTESEREVRQGPLLGFKYKKVRRSLARSLAIALLQKLCGALIFIFYGLNMLDCLRIRREFG 327
            :  |..:..:|.....|...:|.:|   :...:.:.:||:|.|...:.||..::..........|
plant   264 KYMDNLQEFKEDGFFDLFNPRYSRV---VTVGIGLLVLQQLGGLSGYTFYLSSIFKKSGFPNNVG 325

  Fly   328 LILC-----LGLILGFLACFFLVDRLGRRPLLIFSSAGIVFVSIYLGLHFKVWMTMGL----TVM 383
            :::.     :..:||.:    :||:.|||.||..::..:...|:..||.| ::.:.||    |.:
plant   326 VMMASVVQSVTSVLGIV----IVDKYGRRSLLTVATIMMCLGSLITGLSF-LFQSYGLLEHYTPI 385

  Fly   384 SWIALFCIAIFVGCYTAGVGSLTWVLNAELLVRPMRPLG-----CSIVC-AFNWLTAF---FVIC 439
            |  ....:.:|:...|.|:|.:.||:.:|:  .|:...|     |::.. :.||..::   |:..
plant   386 S--TFMGVLVFLTSITIGIGGIPWVMISEM--TPINIKGSAGTLCNLTSWSSNWFVSYTFNFLFQ 446

  Fly   440 WFGSHGVKCQPYLFLLFAIIASLILLFSLIYIPETKKLSSAKIQ 483
            | .|.||      |.::.:|:.:.:||.:..:|||:..|..:||
plant   447 W-SSSGV------FFIYTMISGVGILFVMKMVPETRGRSLEEIQ 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 MFS_GLUT6_8_Class3_like 52..478 CDD:340916 110/451 (24%)
AT3G20460NP_188681.1 MFS_GLUT6_8_Class3_like 54..481 CDD:340916 111/454 (24%)

Return to query results.
Submit another query.