DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and VGT1

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_186959.2 Gene:VGT1 / 821117 AraportID:AT3G03090 Length:503 Species:Arabidopsis thaliana


Alignment Length:526 Identity:112/526 - (21%)
Similarity:211/526 - (40%) Gaps:107/526 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SGTWFAKRPSEMPERHVERAPVRQKINNVGLYKATLYSNIGSFFFGIAVGWSGTAERSVMEQHSY 85
            ||...|::...:.|.|   :|....:  :......|:..:|:..||..:|.:..|..|:.     
plant    22 SGGITAEKEPLLKENH---SPENYSV--LAAIPPFLFPALGALLFGYEIGATSCAIMSLK----- 76

  Fly    86 SFQPT--ELQW---SGVCILLTLGAALWCLPMGLMVR-----LLGCRRTILIQLLPNFLGWFLTV 140
              .||  .:.|   |.|.:.:....:|:...:|.:|.     ::|.|:.:::......:|..:||
plant    77 --SPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTV 139

  Fly   141 FARSVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLE 205
            .|....:|..||...||..|......|:|.||.:.::.||.|..:.|.:.:.|::..:.:. .|.
plant   140 VAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEFSTVLGMVGGYGIG-SLW 203

  Fly   206 LRIINFVNLGLLALGPLQILM-------PESPAYYV-----DHGNIPRAED----SLRFLRG--- 251
            :.:|:........:.|..::|       |.||.:.:     ..||....:.    ||..|||   
plant   204 ITVISGWRYMYATILPFPVIMGTGMCWLPASPRWLLLRALQGQGNGENLQQAAIRSLCRLRGSVI 268

  Fly   252 ------QKYDTRREIDFLTRDPTESEREVRQGPLLGFKYKKVRRSLARSLAIALLQKLCGALIFI 310
                  |..:...|:..:..|...:..|:.:|        |..::|..:..:.|.|::.|....:
plant   269 ADSAAEQVNEILAELSLVGEDKEATFGELFRG--------KCLKALTIAGGLVLFQQITGQPSVL 325

  Fly   311 FYGLNML---------DCLRIRREFGLILCLGLILGFL------ACFFLVDRLGRRPLLIFSSAG 360
            :|..::|         |..||          .::||.|      ....::||:||||||:...:|
plant   326 YYAPSILQTAGFSAAADATRI----------SILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSG 380

  Fly   361 IVFVSIYLGLHFKVWMTMGLTVMSWIALFCIAIFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSI 425
            :|.....||.::..:..:..     :|:..:.::||||....|.:.|::.:|:....:|..|.|:
plant   381 MVISLFLLGSYYMFYKNVPA-----VAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISL 440

  Fly   426 VCAFNWLTAFFVICWFGSHGVKCQPY-----------LFLLFAIIASLILLFSLIYIPETKKLSS 479
            ....|          ||::.:....:           ||..|.:|..:.|.|....:||||.|:.
plant   441 AVLVN----------FGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTL 495

  Fly   480 AKIQQR 485
            .:|:.:
plant   496 EEIEAK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 105/484 (22%)
MFS 63..>226 CDD:119392 37/172 (22%)
VGT1NP_186959.2 MFS_GLUT10_12_Class3_like 53..498 CDD:340920 104/485 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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