DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and slc2a1

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001072458.1 Gene:slc2a1 / 779913 XenbaseID:XB-GENE-5755357 Length:492 Species:Xenopus tropicalis


Alignment Length:453 Identity:110/453 - (24%)
Similarity:197/453 - (43%) Gaps:54/453 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IGSFFFGIAVGWSGTAERSV--------MEQHSYSFQPTELQ--WSGVCILLTLGAALWCLPMGL 114
            |||..||...|.....:..:        :|:::.....:.|.  ||....:.::|..:....:||
 Frog    20 IGSLQFGYNTGVINAPQEVIEGFYNATWLERYNEPIPESTLTSLWSLSVAIFSVGGMVGSFSVGL 84

  Fly   115 MVRLLGCRRTILIQLLPNFLGWFLTVFAR---SVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTT 176
            .|...|.|.::|:..:..||...|..|::   |..||..|||.:|:..|.....||:|..|:|.|
 Frog    85 FVNRFGRRNSMLMANVLAFLAAILMGFSKLAVSFEMLIIGRFVVGLYCGLTTGFVPMYVGEVSPT 149

  Fly   177 KKRGAMGVVFEGACICGVIYSFAMSLFLELRIINFVNLGLLALGP-----------LQILM---- 226
            ..|||:|.:.:    .||:....::....|:.|    :|..:|.|           ||.:|    
 Frog   150 SLRGALGTLHQ----LGVVVGILIAQIFGLKPI----MGNDSLWPFLLGCIFIPAILQCIMLPFC 206

  Fly   227 PESPAY-YVDHGNIPRAEDSLRFLRGQKYDTRREIDFLTRDPTESEREVRQGPLLGFKYKKVRRS 290
            ||||.: .::.....:|:..|:.|||.. |...::..:..:..:..||.:...|..|:....|:.
 Frog   207 PESPRFLLINRNEEDKAKSVLKKLRGTT-DVSSDLQEMKEESRQMMREKKVTILELFRSPLYRQP 270

  Fly   291 LARSLAIALLQKLCGALIFIFYGLNMLDCLRIRREFGLILCLGLI-LGF-LACFFLVDRLGRRPL 353
            :..::.:.|.|:|.|.....:|...:....::.:.....:..|:: ..| :...|:|:|.|||.|
 Frog   271 MFIAIILQLSQQLSGINAVFYYSTMIFQKAQVEQPVYATIGAGIVNTAFTVVSLFVVERAGRRTL 335

  Fly   354 LIFSSAGIVFVSIYLGLHFKVWMTMGLTV------MSWIALFCIAIFVGCYTAGVGSLTWVLNAE 412
            .:....|:...:|.        ||:.|.:      ||::::..|..||..:..|.|.:.|.:.||
 Frog   336 HLIGLGGMAVCAIL--------MTIALALLDSVGGMSYLSIVAIFGFVAFFEIGPGPIPWFIVAE 392

  Fly   413 LLVRPMRPLGCSIVCAFNWLTAFFVICWFGSHGVKCQPYLFLLFAIIASLILLFSLIYIPETK 475
            |..:..||...::....||.:.|.|...|......|..|:|::|.::..:..:|:...:||||
 Frog   393 LFSQGPRPAAIAVAGLSNWTSNFIVGMGFQYVEQLCGAYVFIIFTVLLLIFFVFTYFKVPETK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 110/453 (24%)
MFS 63..>226 CDD:119392 45/186 (24%)
slc2a1NP_001072458.1 MFS_GLUT_Class1 13..457 CDD:340989 110/453 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.