DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and slc2a12

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:615 Identity:125/615 - (20%)
Similarity:219/615 - (35%) Gaps:183/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PPQSSRKSGTWFAKRPSEMPERHV--ERAPVRQKINNVGLYKATLYSNIGSFFFGIAVGWSGTAE 76
            |.:|.|.:....:|...:.|:.|:  |::|..:..|...|   .|.|...:...|:.:|:    |
Zfish     4 PEESIRMTSDPQSKIYVQNPDTHIHLEQSPSAKSGNGRAL---VLCSVSVACLSGLLMGY----E 61

  Fly    77 RSVMEQHSYSFQ-------PTELQWSGVCILLTLGAALWCLPMGLMVRLLGCRRTILIQLLPNFL 134
            .|::.......:       |.:.|..|   .|.|||.|..|..|.::...|.|.||::..|...|
Zfish    62 MSLISGALLQLRDVLTLSCPEQEQVVG---SLLLGAFLLSLGGGTILDHYGRRFTIILTALLCVL 123

  Fly   135 GWFLTVFARSVPMLYAGRFFLGM----CGGAHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVI 195
            |..|:|...|...|..||..:||    .|.|.|    :|.||::....||....|:|...:.|::
Zfish   124 GTLLSVCVVSFWALVVGRMLVGMSVALSGTASC----LYAAEVAPAAWRGRCVCVYELMVVLGML 184

  Fly   196 YSFAMSLFLELRIINFVNL---------GLLALGPLQI----LMPESPAYYV-------DHGNIP 240
            ..|.:|.       .|..:         |.|....||.    |:|:||.:.:       .|..:.
Zfish   185 LGFGLSW-------AFAGVPDGWRFTFGGALLPALLQAGVMPLLPDSPRFLLAQQREKEAHATLL 242

  Fly   241 R----------AEDSLRFLRGQKYDTRREIDFLTRDPTESEREVRQGPLLGFKYKKVRRSLARSL 295
            |          .||.||.:| ......|...||  |..:|...:.|..|:|             .
Zfish   243 RLRAGIKEVEPVEDELRAIR-LAMGAERLHGFL--DLFQSRDNMLQRLLVG-------------A 291

  Fly   296 AIALLQKLCGALIFIFYGLNMLDCLRIRRE---------FGLILCLGLILGFLACFFLVDRLGRR 351
            |:..||:..|....:.|...:|..:.....         ||::    .:.|.:...||||::|.:
Zfish   292 ALVFLQQATGQPNILAYASTVLSSVGFHGNEAATLASTGFGVV----KVGGTIPAIFLVDKVGPK 352

  Fly   352 PLL-------IFSSAGIVFVSIYLGLH-------------FKVWMT-----------MGL----- 380
            .||       :.|:|.:..:::....|             |.::.|           :||     
Zfish   353 ALLCVGVVVMMLSTATLGAITMQSRTHVSSLCRGPGNTANFTLFETGDETDIQTNTPLGLYQPQN 417

  Fly   381 -----------------------------------------------------TVMSWIALFCIA 392
                                                                 ..:.||:|..:.
Zfish   418 KLKTNAFLTSINDTREHWILNHTYDHRTALIETAELSKKDSAKIALQSLHEVSPSLKWISLVSLL 482

  Fly   393 IFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSIVCAFNWLTAFFVICWFGSHGVKC-QPYLFLLF 456
            ::|..::..:|.:..|:.:.:....:|....|::.||||.|...:...|.:...:. .|.:...:
Zfish   483 VYVAGFSISLGPMVHVVLSAIFPTGIRGKAVSVISAFNWATNLLISMTFLTLTERIGLPTVIFSY 547

  Fly   457 AIIASLILLFSLIYIPETKKLSSAKIQQRL 486
            :.::.|:::|.::::||||..|..:|.:.|
Zfish   548 SAMSFLLVVFVIVFVPETKGRSLEQISKEL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 112/563 (20%)
MFS 63..>226 CDD:119392 47/186 (25%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 86/384 (22%)
SP 49..573 CDD:273317 111/561 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576950
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.