DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and itr1

DIOPT Version :10

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_593858.2 Gene:itr1 / 2543145 PomBaseID:SPAC4F8.15 Length:575 Species:Schizosaccharomyces pombe


Alignment Length:488 Identity:104/488 - (21%)
Similarity:194/488 - (39%) Gaps:104/488 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VERAPVRQKINNVGLYKATLYSNIGSFFFG----------IAVGWSGTAERSVMEQHSYSFQPTE 91
            ||..||.:.:     :.....:.||...||          :.:|.|       :..|..:....|
pombe    78 VEDQPVSKWV-----WVLAFAAGIGGLLFGYDTGVISGALVVIGTS-------LGGHELTNGGKE 130

  Fly    92 LQWSGVCILLTLGAALWCLPMGLMVRLLGCRRTILIQLLPNFLGWFLTVFARSVPMLYAGRFFLG 156
            ...|..    :|||.|..:..|.:....|.:..|.|..:...:|..:.|.|..:..:..|||.:|
pombe   131 FITSAT----SLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIG 191

  Fly   157 MCGGAHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLELRIINFVNLGL----- 216
            ...|...:::|:|.:||:.:|.||.:.:::......|.:.::.:....|     .|:.|.     
pombe   192 WGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFE-----HVHNGWRWMVG 251

  Fly   217 LALGP------LQILMPESPAYYVDHGNIPRAEDSLRFLRGQKYDTRREIDFLTRDPTESERE-- 273
            ||:.|      :.|.:||||...|..   .|::::        |:|...| :.|..|.|.:.:  
pombe   252 LAMVPAAFQLFILIWLPESPRLLVKK---ERSQEA--------YNTLARI-YPTAHPYEIKTKLY 304

  Fly   274 -VRQG---PLLGFKYKKV-------------RRSLARSLAIALLQKLCGALIFIFYGLNMLDCLR 321
             :::|   |..|.:::|:             .|:|..:..:..:|:|.|....:::...:.:.:.
pombe   305 LIQEGVRDPFSGSRWQKIVKTFKELYFNPSNFRALILACGLQAMQQLSGFNSLMYFSSTIFEVVG 369

  Fly   322 IRR--EFGLILCLGLILGFLACFFLVDRLGRRPLLIFSSAGIVFVSIYLGLHFKVW-------MT 377
            ...  ..|||:.....:..:..|.::|..|||.||:.:..|::...|...:.|...       .|
pombe   370 FNNPTATGLIIAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYT 434

  Fly   378 MGLTVMSW--IALFCIAIFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSIVCAFNWLTAFFVICW 440
            .|.: .:|  :.|..:.::|..|.:|:|:|.| ..:||....:|.||..:..|.||.        
pombe   435 SGQS-NAWAIVVLISMIVYVASYASGLGNLPW-QQSELFPMSVRGLGTGMSTAVNWA-------- 489

  Fly   441 FGSHGVKCQPYLFLL--------FAIIASLILL 465
             |:.|:... :|.|:        ||:...|..|
pombe   490 -GNLGIGAS-FLTLMSEITPTGTFALYGGLCFL 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 MFS_GLUT6_8_Class3_like 52..478 CDD:340916 100/473 (21%)
itr1NP_593858.2 MFS_HMIT_like 93..531 CDD:340918 100/468 (21%)

Return to query results.
Submit another query.