DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glut3 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:557 Identity:110/557 - (19%)
Similarity:193/557 - (34%) Gaps:141/557 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LYKATLYSNIGSFFFGIAVGWSGTAERSVMEQHSYSFQPTELQWSGVCILLTLG-AALWCLPMGL 114
            :|.....|.||.|.||...  |..:...:....:...:|.:..|..|.:.::.| ||:..|..|.
 Worm    25 VYILAAASVIGGFLFGYDT--SVVSAAMLYMPDAPGLKPMDTVWQEVLVSISPGMAAVGSLMSGT 87

  Fly   115 MVRLLGCRRTILIQLLPNFLGWFLTVFARSVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTTKKR 179
            ....:|.|:.||.......:|..:...:.:..||..||..||:..|...::||:|..|.:.|..|
 Worm    88 SSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPTHVR 152

  Fly   180 GAMGVVFE--------GACICGVIYSF---------AMSLFLEL-RIINFVNLGLLALGPLQILM 226
            |.:...|.        .|.|.|..:|:         .|..|..: .||.||..         :.:
 Worm   153 GMLVAAFALMISFGQVVANITGGAFSYIDPYNVGWRLMFAFAAVPSIIQFVCF---------MFL 208

  Fly   227 PESPAYYVDHGNIPRAEDSL-RFLRGQK----YDTRREIDFLTRDPTESEREVRQGPLLG--FKY 284
            ||:|.:..::|......:.| :...|.|    |:....|.|......|:|:....||::.  .|.
 Worm   209 PETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEIIAFNEDQAKENEKAHASGPVIWRILKT 273

  Fly   285 KKVRRSLARSLAIALLQKLCGALIFIFYGLNMLDCLRIRRE-----FGLILCLGLILGFLACFFL 344
            ..|.::......:...|:|.|....::|..:::....|...     ..::|.|...:|......|
 Worm   274 PHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGISNNHTTIWISVLLSLCNFIGPFVPMSL 338

  Fly   345 VDRLGRRPLLIFSSAGIVFVSIYLGLHF------------------------------------- 372
            ::::|||.:.:||...:|...:::|:.|                                     
 Worm   339 IEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQYGSNFNSSYPDAKGCMAYSNCD 403

  Fly   373 -----------------------------KVWMTMGLTVMS---------WIALFC--------- 390
                                         :|:.:.|....|         |...:|         
 Worm   404 YCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNGSIANNFKWEKYYCDTKYTLLPI 468

  Fly   391 --IAIFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSIVCAFNW-------LTAFFVICWFGSHGV 446
              ..:::..:::|..||.||||:|......|....:|....||       ||...:....|.:|.
 Worm   469 IACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIALTYLSLTQVIGKYGA 533

  Fly   447 KCQPYLFLLFAIIASLILLFSLIYIPETKKLSSAKIQ 483
                  |.|:|.:..:..:|.|..:||||..|..:::
 Worm   534 ------FWLYAGLTVIAFIFILFLVPETKGYSIEEVE 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 108/548 (20%)
MFS 63..>226 CDD:119392 42/181 (23%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 104/539 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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