DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:590 Identity:131/590 - (22%)
Similarity:210/590 - (35%) Gaps:160/590 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PQSSRKSGTWFAKRPSEMPERHVERAPVRQKINNVGLYKATLYSNIGSFFFGIAVGWSGTAERSV 79
            |.|..|:| ||                         :|.....:.||.|.||...|....|...|
 Worm    18 PSSDPKTG-WF-------------------------VYMLAFSAVIGGFLFGYDTGIVSAAMLYV 56

  Fly    80 MEQHSYSFQPTELQWSGVCILLTLG-AALWCLPMGLMVRLLGCRRTILIQLLPNF-LGWFLTVFA 142
              .::...:|.:..|..:.:.:|.| ||:..|..|.....|| |:.|:|.....| :|..:...|
 Worm    57 --PNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLG-RKKIIIGASVTFTIGAIICAAA 118

  Fly   143 RSVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTTKKRGAMGVVFE-----GACICGVI---YSFA 199
            .:..:|..||..||:..|...::||||.:|.|.:..||.:...|:     |..|..:|   :|:.
 Worm   119 WTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSYV 183

  Fly   200 ---------MSLFLEL-RIINFVNLGLLALGPLQILMPESPAYYVDHGNIPRAEDSL-RFLRGQ- 252
                     |..|..: .||.||..         :.:||||.:..:||....|.:.| |...|. 
 Worm   184 DPDQVGWRLMFAFAAVPAIIQFVCF---------LFLPESPRWLYEHGRTVEAREVLTRIYNGHT 239

  Fly   253 ---KYDTRREIDFLTRDPTESERE-VRQGPLL--GFKYKKVRRSLARSLAIALLQKLCGALIFIF 311
               .|:. .||.|...:...::.| ...||.:  ..|...||:::.....:.:.|:|.|....::
 Worm   240 EWVDYEI-NEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQMFQQLSGINTVMY 303

  Fly   312 YGLNMLDCLRIRREFGLI-LCLGL-ILGFLACFF---LVDRLGRRPLLIFSSAGIVFVSIYLGLH 371
            |..|::....::.....| :.:|. .:.||..|.   ||:|:|||.||:.|..|::...|.:|:.
 Worm   304 YTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMIGVILFLIAMGVS 368

  Fly   372 F--------------------------------------------------KV------------ 374
            |                                                  ||            
 Worm   369 FLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSD 433

  Fly   375 ----WMTMGL----------TVMSWIALFC-----------IAIFVGCYTAGVGSLTWVLNAELL 414
                :...|:          |...|...:|           :..::..::||...|.||||||..
 Worm   434 DSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFY 498

  Fly   415 VRPMRPLGCSIVCAFNWLTAFFVICWFGSHGVKCQPY-LFLLFAIIASLILLFSLIYIPETKKLS 478
            ....|....|:..|.||:....|...|.|.......| .|.::.....:.|:|...::||||..|
 Worm   499 PLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYS 563

  Fly   479 SAKIQ 483
            ..:::
 Worm   564 IDEVE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 124/545 (23%)
MFS 63..>226 CDD:119392 47/182 (26%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 119/536 (22%)
MFS <190..>249 CDD:421695 17/68 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157953
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.