DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and slc2a12

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_031758281.1 Gene:slc2a12 / 100487147 XenbaseID:XB-GENE-1012136 Length:591 Species:Xenopus tropicalis


Alignment Length:587 Identity:112/587 - (19%)
Similarity:212/587 - (36%) Gaps:171/587 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RAPVRQKINNVGLYKATLYSNIGSFFFGIAVGWS-GTAERSVMEQHSYSFQPTELQWSGVCILLT 102
            |...||.....|.....|.|::.:...|:.||:. |....::::..|. .:.|..|...|...|.
 Frog    22 RTNPRQTGKREGCGAFILLSSVIAAVSGLLVGYELGIISGALLQLQSL-LELTCQQQEIVVSALL 85

  Fly   103 LGAALWCLPMGLMVRLLGCRRTILIQLLPNFLGWFLTVFARSVPM-------LYAGRFFLGMCGG 160
            :||.:..|..|.::.|.|.|.||:...:       |.||:..:|:       |.|||..:|:...
 Frog    86 IGAFVASLVGGSLIDLYGRRITIIFTSI-------LLVFSNLLPVVIVSYGSLIAGRIVIGVSIS 143

  Fly   161 AHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLELRIINF----VNLG------ 215
            ...:...:|.||||...|||.:..:.|...:.|:::::         |.|:    |:.|      
 Frog   144 LSAIATCVYIAEISPQHKRGMLVSLNELMIVVGILFAY---------ICNYLFASVSNGWKYMFG 199

  Fly   216 -LLALGPLQIL----MPESPAYYVDHGNIPRAEDSLRFLRGQKYDTRREIDFLTRDPTESEREVR 275
             ::.|..||.:    :|:||.:.:..|....|...|:.||.            |.:.:|....::
 Frog   200 LIIPLAALQAIAMYFLPQSPRFLIMKGYDDAAGKVLQKLRA------------TTNISEELTAIK 252

  Fly   276 QGPLLGFKYK---------KVRRSLARSLAIALLQKLCGALIFIFYGLNMLDCLRIR-REFGLIL 330
            ......::|:         .:|..|...|.::...::.|....:||...:|..:..: .|...:.
 Frog   253 SSIKAEYQYRFLDLFCSRDNMRVRLLIGLTLSFFVQITGQPNILFYASTVLKSVGFQSTEAASLA 317

  Fly   331 CLGL----ILGFLACFFLVDRLGRRPLLIFSSA-------GIVFVSIYLGLHF------------ 372
            ..|:    ::..:.....||::|.:..|...||       .:..||:.|.::|            
 Frog   318 STGIGVIKVVSTIPAIIFVDKIGSKTFLCIGSAVMAVSLVSVGLVSLQLDVNFNNICKVHTMQNH 382

  Fly   373 -----------------------------------------KVW--------MTMGLT------- 381
                                                     |.|        .::|:|       
 Frog   383 SLQDSIIYGPLSLSKPNESLFEETSTLESTKASYLSPLNGTKSWHFTTQEVDSSIGVTPKETKIK 447

  Fly   382 --------VMSWIALFCIAIFVGCYTAGVGSLTWVLNAELLVRPMRPLGCSIVCAFNW------- 431
                    .|.|:.|..:..||..::.|:|.:.|::.:|:....::....:|..:.||       
 Frog   448 SQPDGIPEYMKWLCLASLLAFVAAFSIGLGPMAWLVQSEIFPAGIKGRAFAITSSMNWGMNLLIS 512

  Fly   432 ---LTAFFVICWFGSHGVKCQPYLFLLFAIIASLILLFSLIYIPETKKLSSAKIQQRLGGLINRP 493
               ||...:|      |:   |::...:|:::...|:|.::::|.||.....:|...|.   ||.
 Frog   513 LTFLTLTEII------GL---PWMLFGYALMSIASLVFVIMFVPNTKGRPLEEISMELA---NRS 565

  Fly   494 AV 495
            .|
 Frog   566 YV 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 102/553 (18%)
MFS 63..>226 CDD:119392 44/185 (24%)
slc2a12XP_031758281.1 MFS_GLUT12_Class3 40..557 CDD:340993 102/554 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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