DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut3 and slc2a1b

DIOPT Version :9

Sequence 1:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_002662574.1 Gene:slc2a1b / 100321338 ZFINID:ZDB-GENE-090915-1 Length:489 Species:Danio rerio


Alignment Length:478 Identity:115/478 - (24%)
Similarity:202/478 - (42%) Gaps:64/478 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IGSFFFGIAVGWSGTAERSVME---------QHSYSFQPTELQ--WSGVCILLTLGAALWCLPMG 113
            |||..||...|.. .|.:.::|         :|......|.:.  ||....:.::|..:....:|
Zfish    20 IGSLQFGYNTGVI-NAPQKIIEAFYNETWTARHGDMISKTTMTTLWSLSVAIFSVGGIVGSFSVG 83

  Fly   114 LMVRLLGCRRTILIQLLPNFLGWFLTVF---ARSVPMLYAGRFFLGMCGGAHCVVVPIYNAEIST 175
            |.|...|.|.::|:..:..|:...|..|   |.|..||..|||.:|:..|.....||:|..|::.
Zfish    84 LFVNRFGRRNSMLMANVLAFIAAALMGFSKMAASWEMLIIGRFVVGLYSGLSTGFVPMYVGEVAP 148

  Fly   176 TKKRGAMGVVFEGACICGVIYS--FAMSLFLELR-----IINFVNLGLLALGPLQILMPESPAY- 232
            |..|||:|.:.:...:.|::.:  |.|...:...     ::.|..:..|....|..:.||||.: 
Zfish   149 TALRGALGTLHQLGIVVGILMAQVFGMEAIMGNATMWPFLLGFTFIPALVQCCLLPICPESPRFL 213

  Fly   233 YVDHGNIPRAEDSLRFLRGQKYDTRREIDFLTRDPTESEREVRQGPLLGFKYKKV---------- 287
            .::.....:|:..|:.|||            |.|.:...:|:::......:.|||          
Zfish   214 LINRNEESKAKSVLKKLRG------------TTDVSADMQEMKEESRQMMREKKVTIPELFRSPL 266

  Fly   288 -RRSLARSLAIALLQKLCGALIFIFYGLNMLDCLRIRREFGLILCLGLI-LGF-LACFFLVDRLG 349
             |:.:..::.:.|.|:|.|.....:|...:.:...:::.....:..|:: ..| :...|:|:|.|
Zfish   267 YRQPIVIAIMLQLSQQLSGINAIFYYSTKIFEKAGVQQPVYATIGAGVVNTAFTVVSLFVVERAG 331

  Fly   350 RRPLLIFSSAGI----VFVSIYLGLHFKV-WMTMGLTVMSWIALFCIAIFVGCYTAGVGSLTWVL 409
            ||.|.:....|:    :.::|.:.|..|. ||    :.||.:|:|.   ||..:..|.|.:.|.:
Zfish   332 RRSLHLLGLLGMAGSAILMTIAIALLEKYDWM----SYMSIVAIFA---FVAFFEIGPGPIPWFI 389

  Fly   410 NAELLVRPMRPLGCSIVCAFNWLTAFFVICWFGSHGVKCQPYLFLLFAIIASLILLFSLIYIPET 474
            .|||..:..||...::....||...|.|...|......|..|:|::|.:......:|:...:|||
Zfish   390 VAELFSQGPRPSAFAVAGFSNWTANFIVGMCFQYVEEVCGAYVFVIFTVFLLCFFIFTYFKVPET 454

  Fly   475 KKLS----SAKIQQRLGGLINRP 493
            |..:    ||..:|..|...:.|
Zfish   455 KGRTFDEISAGFRQASGAEKHTP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 112/467 (24%)
MFS 63..>226 CDD:119392 43/183 (23%)
slc2a1bXP_002662574.1 Sugar_tr 17..466 CDD:278511 112/465 (24%)
MFS 61..449 CDD:119392 96/406 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576928
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.