Protein Alignment Ubx and HB-3

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_568309.2
• Gene: HB-3 / 831367
• AraportID: AT5G15150
• Length: 314
• Species: Arabidopsis thaliana
• Alignment Length: 179
• Identity: 44/179 - (24%)
• Similarity: 66/179 - (36%)
• Gaps: 52/179 - (29%)

  Fly   229 SSLHQASNHTFYPW---------MAIAGE------CPEDPTKSKIRSDLTQYG---GISTDMGKR 275
            :||.....|.||..         |:..|.      ..:.||.:...:|..|.|   .:|.|
plant    46 TSLPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDD---- 106

  Fly   276 YSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 340
                          |::.:....::.....|...|||.|...:.|...|::::|.||.|..|||.
plant   107 --------------GSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIA 157

  Fly   341 IWFQNRRMK------------LKKEIQAIKELNE----QEKQAQAQKAA 373
            |||||||.:            |||:...:|..|:    ..|:..|:..|
plant   158 IWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVA 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	22/67 (33%)
HB-3	NP_568309.2	Homeodomain	115..168	CDD:459649	21/52 (40%)
		HALZ	170..208	CDD:460477	8/37 (22%)