Protein Alignment Ubx and HB-2

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_193411.1
• Gene: HB-2 / 827384
• AraportID: AT4G16780
• Length: 284
• Species: Arabidopsis thaliana
• Alignment Length: 185
• Identity: 48/185 - (25%)
• Similarity: 78/185 - (42%)
• Gaps: 42/185 - (22%)

  Fly   210 TAWNANCTISGAAAQTAAASSLHQASNHTFY--------PWMAIAGECPEDPTKSKIRSDLTQYG 266
            ::||.:.|.|      ...|...|....||.        |..|..|:  ||...|...|.
plant    44 SSWNESFTSS------VPNSDSSQKETRTFIRGIDVNRPPSTAEYGD--EDAGVSSPNST----- 95

  Fly   267 GISTDMGKRYSESLAGSLLPDWLGTNGL-------RRRGRQTYTRYQTLELEKEFHTNHYLTRRR 324
             :|:..||| ||....:   |..|:.|:       ..|.:...::.|:..||:.|..:..|..::
plant    96 -VSSSTGKR-SEREEDT---DPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQ 155

  Fly   325 RIEMAHALCLTERQIKIWFQNR--RMKLKK-EI------QAIKELNEQEKQAQAQ 370
            :..:|..|.|..||:::|||||  |.|||: |:      :..:.|.|:.::.|.:
plant   156 KQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKE 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	19/57 (33%)
HB-2	NP_193411.1	HD-ZIP_N	8..107	CDD:461370	21/77 (27%)
		HOX	128..182	CDD:197696	17/53 (32%)
		HALZ	184..227	CDD:128634	5/27 (19%)