Protein Alignment Ubx and HB-12

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_191748.1
• Gene: HB-12 / 825362
• AraportID: AT3G61890
• Length: 235
• Species: Arabidopsis thaliana
• Alignment Length: 138
• Identity: 31/138 - (22%)
• Similarity: 58/138 - (42%)
• Gaps: 43/138 - (31%)

  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK---------- 349
            :...::.::..|...||..|.:...|..|:::::|..|.|..||:.|||||:|.:
plant    27 KSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEY 91

  Fly   350 ----------------LKKEIQA----IKELNEQEKQAQAQK--------AAAAAAAAAAVQG-- 384
                            :|||.|:    ::.|||:.::.:.:|        ..|.:::..:..|
plant    92 NTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSSTESHNGKS 156

  Fly   385 ---GHLDQ 389
               |.|||
plant   157 EPEGRLDQ 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	17/81 (21%)
HB-12	NP_191748.1	Homeodomain	33..83	CDD:459649	17/49 (35%)
		HALZ	85..126	CDD:460477	7/40 (18%)