Protein Alignment Ubx and HB4

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_182018.1
• Gene: HB4 / 819100
• AraportID: AT2G44910
• Length: 318
• Species: Arabidopsis thaliana
• Alignment Length: 205
• Identity: 50/205 - (24%)
• Similarity: 88/205 - (42%)
• Gaps: 32/205 - (15%)

  Fly   177 SHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYP 241
            :|...|:|...:.:..|.:||....|..|..|    .::..:.....:.|..||.:.|.:
plant    61 THLFQSSGIKRTTAERNSDAGSFLRGFNVNRA----QSSVAVVDLEEEAAVVSSPNSAVS----- 116

  Fly   242 WMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSL--LPDWLGTNGLRRRGRQTYTR 304
              :::|.          :.||....|...:..:|.|.|..|..  ..|..|.||...|.:...::
plant   117 --SLSGN----------KRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSK 169

  Fly   305 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNR--RMKLKK---EIQAIK----EL 360
            .|.|.||:.|..:..|..::::.:|..|.|..||:::|||||  |.|||:   :.:.:|    .|
plant   170 DQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNL 234

  Fly   361 NEQEKQAQAQ 370
            .|:.::.|.:
plant   235 TEENRRLQKE 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	20/57 (35%)
HB4	NP_182018.1	HD-ZIP_N	8..124	CDD:461370	14/83 (17%)
		Homeodomain	162..216	CDD:459649	18/53 (34%)
		HALZ	218..261	CDD:128634	5/27 (19%)