Protein Alignment Ubx and nkx2.1

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571851.1
• Gene: nkx2.1 / 81883
• ZFINID: ZDB-GENE-010404-1
• Length: 346
• Species: Danio rerio
• Alignment Length: 230
• Identity: 59/230 - (25%)
• Similarity: 95/230 - (41%)
• Gaps: 54/230 - (23%)

  Fly   167 YLDTSGGSPVSH--RGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAW---NANCTISGAAAQTA 226
            ::..:|.|.:||  .||...||:   |...:....|.|:..:...|:|   |.:...|..:....
Zfish    67 HMTAAGVSQLSHTAMGGYCNGNL---GNMSDLPAYQDGMRGSTTATSWYGTNPDPRFSTISRFMG 128

  Fly   227 AASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGT 291
            ::|.::..|..|.                    |.|       .|:||.     .|.|      |
Zfish   129 SSSGMNMGSMSTL--------------------SSL-------ADVGKG-----MGPL------T 155

  Fly   292 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQA 356
            :..||:.|..:::.|..|||:.|....||:...|..:|..:.||..|:||||||.|.|:|:  ||
Zfish   156 STPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR--QA 218

  Fly   357 IKELNEQEKQ------AQAQKAAAAAAAAAAVQGG 385
            ..::::|:.|      .|.|::....|....|:.|
Zfish   219 KDKVSQQQMQQDNGSCQQQQQSPRRVAVPVLVKDG 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	22/55 (40%)
nkx2.1	NP_571851.1	Homeodomain	160..216	CDD:459649	22/55 (40%)