DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and lbx1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:146 Identity:37/146 - (25%)
Similarity:66/146 - (45%) Gaps:29/146 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 DMGKRYSESLAGSLLPDWLGTNGL-----------RRRGRQTYTRYQTLELEKEFHTNHYLTRRR 324
            ::..:..:.|..|:|....|.:|:           ||:.|..:|.:|..||||.|....||:...
 Frog    90 ELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPAD 154

  Fly   325 RIEMAHALCLTERQIKIWFQNRRMKLKKE------------------IQAIKELNEQEKQAQAQK 371
            |.::|..|.||..|:..||||||.|||::                  ::|:..::|.|::..:.:
 Frog   155 RDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESVKKMSPSTVEAVLTISELEEETNSVR 219

  Fly   372 AAAAAAAAAAVQGGHL 387
            ..:.:.:......||:
 Frog   220 DDSRSRSPQLGLSGHM 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Homeodomain 126..182 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265 3/24 (13%)
Blue background indicates that the domain is not in the aligned region.

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