Protein Alignment Ubx and Hoxd9

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001166940.1
• Gene: Hoxd9 / 688999
• RGDID: 1582908
• Length: 343
• Species: Rattus norvegicus
• Alignment Length: 270
• Identity: 95/270 - (35%)
• Similarity: 119/270 - (44%)
• Gaps: 73/270 - (27%)

  Fly   108 GSNGGGGGGGGGGGGGAGGTGGAG--NANGGNAANANGQN---NPAGGMPVRPSACTPDSRVGGY 167
            |..||.|||||.||||.||:||.|  .:.||   .|||::   .|..|....|||.:..|
  Rat   112 GFPGGAGGGGGSGGGGGGGSGGPGPVPSPGG---PANGRHYGIKPETGAAPAPSAASTSS----- 168

  Fly   168 LDTSGGSPVSHRGGSAGGNVSVSGG--------------------NGNAGGVQSGVGVAGAGTAW 212
             .||..|.......||......|||                    .||..||  |:| .|.||
  Rat   169 -STSSSSSSKRTECSAARESQGSGGPEFPCNSFLRDKAAAAAAAAAGNGPGV--GIG-TGPGT-- 227

  Fly   213 NANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYS 277
                   |.:::.:|.|. |.:      |...:..|..:.|...:.:.|
  Rat   228 -------GGSSEPSACSD-HPS------PGCPLKEEEKQPPQPPQQQLD---------------- 262

  Fly   278 ESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 342
               ..:...:|:.....|:: |..||:||||||||||..|.||||.||.|:|..|.|||||:|||
  Rat   263 ---PNNPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 323

  Fly   343 FQNRRMKLKK 352
            |||||||:||
  Rat   324 FQNRRMKMKK 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	38/55 (69%)
Hoxd9	NP_001166940.1	Hox9_act	1..>155	CDD:461369	23/45 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	113..196		35/91 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	220..267		13/82 (16%)
		Homeodomain	277..328	CDD:459649	35/51 (69%)