Protein Alignment Ubx and Tlx2

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001165596.1
• Gene: Tlx2 / 680117
• RGDID: 1595506
• Length: 284
• Species: Rattus norvegicus
• Alignment Length: 266
• Identity: 67/266 - (25%)
• Similarity: 101/266 - (37%)
• Gaps: 85/266 - (31%)

  Fly   122 GGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGG----S 182
            ||..|.|..|.:.|.:||.::|.:..:|..|....|..|..        ||..|    ||    .
  Rat    32 GGGLGPGQVGQSQGESAAFSSGFHGTSGYAPAGSLASLPRG--------SGVGP----GGVIRVP 84

  Fly   183 AGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAG 247
            |...|.|...:|.|..|....|:.|.|          |.|..|              :|||
  Rat    85 AHRPVPVPPPSGAAPAVAGPSGLGGPG----------GLAGLT--------------FPWM---- 121

  Fly   248 ECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGL-----------RRRGRQT 301
                                   |.|:|:::....:.|..:.||..:           |::.|.:
  Rat   122 -----------------------DSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTS 163

  Fly   302 YTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQ 366
            ::|.|.||||:.|....||....|..:|.||.:|:.|:|.||||||.|.:::       ..:|::
  Rat   164 FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ-------TAEERE 221

  Fly   367 AQAQKA 372
            |:..:|
  Rat   222 AERHRA 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	24/55 (44%)
Tlx2	NP_001165596.1	Homeodomain	158..214	CDD:459649	24/55 (44%)