Protein Alignment Ubx and nkx2.4b

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571664.1
• Gene: nkx2.4b / 58112
• ZFINID: ZDB-GENE-000830-1
• Length: 307
• Species: Danio rerio
• Alignment Length: 223
• Identity: 55/223 - (24%)
• Similarity: 80/223 - (35%)
• Gaps: 62/223 - (27%)

  Fly   174 SPVSH--RGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN 236
            |..||  .||...|.:   |..|:....|..:......|||
Zfish    66 SQFSHSTMGGYCNGTI---GAMGDLPSYQESMRNGATATAW------------------------ 103

  Fly   237 HTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGL------- 294
                     .|..||           .:|..||..||.  |..:....||....:..:
Zfish   104 ---------YGSNPE-----------PRYPTISRFMGP--SAGMNMGTLPGMDASKSMVTLHAAP 146

  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 359
            ||:.|..:::.|..|||:.|....||:...|..:|..:.||..|:||||||.|.|:|:  ||..:
Zfish   147 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR--QAKDK 209

  Fly   360 LNEQEKQAQ--AQKAAAAAAAAAAVQGG 385
            .::|:....  ||::....|....|:.|
Zfish   210 ASQQQDSGNMCAQQSPRRVALPVLVKDG 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	22/55 (40%)
nkx2.4b	NP_571664.1	Homeodomain	148..204	CDD:459649	22/55 (40%)