Protein Alignment Ubx and hoxc12b

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571620.1
• Gene: hoxc12b / 58062
• ZFINID: ZDB-GENE-000329-17
• Length: 283
• Species: Danio rerio
• Alignment Length: 262
• Identity: 73/262 - (27%)
• Similarity: 107/262 - (40%)
• Gaps: 62/262 - (23%)

  Fly   133 ANGGNAANAN----GQNNPAGGMPVRPS-ACT--PDSRVGG-----------------------Y 167
            |:||..|...    .:.:....:|..|| ||:  |.|.:.|                       |
Zfish    31 ASGGQLAGLQTLRLSRRDNVCSLPWNPSEACSGYPQSHISGPVTLNHTYNQSCDITRQEDNKCFY 95

  Fly   168 LD----TSGGSP------VSHRGGSAGGNVSVSGGNG--NAGGVQSGVGVAGAGTAWNANCTISG 220
            .|    ||||..      :|..|.....:||::..||  |..|:.:|    |:.:.::.......
Zfish    96 SDSACATSGGGDNNSTNLISKEGALDNSSVSITAENGQNNLNGMDNG----GSYSKYDCLTPAEQ 156

  Fly   221 AAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLL 285
            .........||...|..:|....|        .|.|.|...||     |.|:....:....|:|
Zfish   157 PIPNPRLCRSLESVSGCSFINEGA--------KTSSGITHSLT-----SPDIQTSVAALNGGAL- 207

  Fly   286 PDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 350
              |...:...|:.|:.|::.|..|||.||..|.::||:||.|::..|.||::|:||||||||||.
Zfish   208 --WYPMHRQTRKKRKPYSKLQLNELEGEFILNEFITRQRRRELSDRLNLTDQQVKIWFQNRRMKK 270

  Fly   351 KK 352
            |:
Zfish   271 KR 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	29/55 (53%)
hoxc12b	NP_571620.1	Homeodomain	216..272	CDD:459649	29/55 (53%)