Protein Alignment Ubx and hoxa5a

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_073787191.1
• Gene: hoxa5a / 58055
• ZFINID: ZDB-GENE-000823-9
• Length: 265
• Species: Danio rerio
• Alignment Length: 385
• Identity: 112/385 - (29%)
• Similarity: 139/385 - (36%)
• Gaps: 154/385 - (40%)

  Fly     1 MNSYFEQASGFYG-------HP------HQATGMAMGSGGHHDQTASAAAAAYRGFPLSLGMSPY 52
            |:|||  .:.|.|       :|      |.::|....|.|.|   :...|..|.|..||.|.|.
Zfish     1 MSSYF--VNSFCGRYPNGVDYPLHNYGDHNSSGQCRDSTGMH---SGRYACGYNGMDLSTGHSS- 59

  Fly    53 ANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGGGGGGG 117
            ..|.|....:...|..|.||...:        |.|
Zfish    60 PGHFLSSGERTQSYKDSPTATPVR--------YNQ------------------------------ 86

  Fly   118 GGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTS--GGSPVSHRG 180
                                              ||..|:..|.|   .:|..|  ..||||.:.
Zfish    87 ----------------------------------PVTASSAEPSS---DHLPCSSLANSPVSEQS 114

  Fly   181 GSAGGNVSVSGGNGNA----GGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHT--- 238
            ..| ..:|:|...|:|    |.|.|..||:          .:|.:..:.....|...||.:.
Zfish   115 HRA-LKISLSSTAGSASKSFGTVLSREGVS----------KVSSSMEEEKPPGSGQTASQNVSEA 168

  Fly   239 --FYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQT 301
              .||||          .|..|..|                 :|||   |:       .:|.|..
Zfish   169 PQIYPWM----------RKLHISHD-----------------NLAG---PE-------GKRPRTA 196

  Fly   302 YTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELN 361
            ||||||||||||||.|.|||||||||:||.|||:||||||||||||||.||: ..:|.:|
Zfish   197 YTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD-NKLKSMN 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	45/55 (82%)
hoxa5a	XP_073787191.1	None