Protein Alignment Ubx and hoxa1a

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571611.1
• Gene: hoxa1a / 58051
• ZFINID: ZDB-GENE-000823-5
• Length: 329
• Species: Danio rerio
• Alignment Length: 382
• Identity: 104/382 - (27%)
• Similarity: 143/382 - (37%)
• Gaps: 114/382 - (29%)

  Fly    24 GSGGHHDQTASAAAAAYRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDG---AGAY 85
            ||||      |.:..|:.|           :|.|      |.:.:|.....|...||.   :...
Zfish    17 GSGG------SCSVRAFHG-----------DHGL------STFQSSCAVRLNSCSGDERFMSNIS 58

  Fly    86 KQDCLNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGG 150
            .||.:|.:......|:                   ..|......:.:.:.|..:...|.|:.|..
Zfish    59 SQDVINSQPQQAGSYQ-------------------SPGTLSITYSAHPSYGTQSFCTGYNHYALN 104

  Fly   151 MPVRPSACTPDSRVGGYLDTSG--GSPV----SHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAG 209
            ..|..|...|..   |.|..||  .|.|    .||.|.:.|||.:.|        |...|.|..|
Zfish   105 QDVESSVSFPQC---GPLVYSGNISSTVVQHRHHRHGYSSGNVHLHG--------QFQYGSATYG 158

  Fly   210 TAWN-ANCT-ISGAA---------AQTAAASSLHQA--SNHTFYPWMAIAGECPEDPTKSKIRSD 261
            .:.: ||.| ::|.:         ...|..|.|...  :..|| .||.:    ..:|.|:
Zfish   159 NSSDQANLTFVAGCSNPLSPLHVPHHDACCSPLSDGVPTGQTF-DWMKV----KRNPPKT----- 213

  Fly   262 LTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 326
                       ||.......|.  |:.:.||         ::..|..|||||||.|.||||.||:
Zfish   214 -----------GKAGEYGFGGQ--PNTVRTN---------FSTKQLTELEKEFHFNKYLTRARRV 256

  Fly   327 EMAHALCLTERQIKIWFQNRRMKLKK-EIQAI--KELNEQ----EKQAQAQKAAAAA 376
            |:|.:|.|.|.|:||||||||||.|| |.:.:  |.|:||    ||...|.:.:.:|
Zfish   257 EIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPKSLSEQKDGLEKTEDASEKSPSA 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	31/55 (56%)
hoxa1a	NP_571611.1	Antp-type hexapeptide	200..205		3/5 (60%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	208..227		6/36 (17%)
		Homeodomain	229..282	CDD:459649	33/61 (54%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	277..329		14/37 (38%)