Protein Alignment Ubx and hoxa9b

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571608.1
• Gene: hoxa9b / 58048
• ZFINID: ZDB-GENE-000823-2
• Length: 258
• Species: Danio rerio
• Alignment Length: 198
• Identity: 61/198 - (30%)
• Similarity: 84/198 - (42%)
• Gaps: 58/198 - (29%)

  Fly   212 WNANCTISGAA----AQTAAASSLHQASNH----------TFYPW-------------------- 242
            :.|..:|.||:    ..|.|:.:.|...:|          :..||
Zfish    53 FQAKSSIFGASWSPVQPTGASIAYHPYIHHPCSTGDSDGASVRPWALEPLPALPFTGLSTDTHQD 117

  Fly   243 -----MAIAGECP------------EDPTKSKIRSDLTQYGG------ISTDMGKRYSESLAGSL 284
                 :..:|||.            ...|:.|:..|....|.      ..|.:....|:....:.
Zfish   118 IKLEPLVGSGECTTHTLLVAETDNNTTQTERKVPDDAVSNGSHDEKIPAETKLDLDPSKCNQDNP 182

  Fly   285 LPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK 349
            |.:||.....|:: |..||::|||||||||..|.||:|.||.|:|..|.|||||:||||||||||
Zfish   183 LSNWLHAKSTRKK-RCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRMK 246

  Fly   350 LKK 352
            :||
Zfish   247 MKK 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	36/55 (65%)
hoxa9b	NP_571608.1	Hox9_act	1..174	CDD:461369	18/120 (15%)
		Homeodomain	193..249	CDD:459649	37/56 (66%)