Protein Alignment Ubx and hoxa9a

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571607.2
• Gene: hoxa9a / 58047
• ZFINID: ZDB-GENE-000823-1
• Length: 250
• Species: Danio rerio
• Alignment Length: 215
• Identity: 68/215 - (31%)
• Similarity: 91/215 - (42%)
• Gaps: 65/215 - (30%)

  Fly   155 PSACTPDSR---VGGY-----LDTSGGSP------VSHRGGSAGGNVSVSGGNGNAGGVQSGVGV 205
            ||...|.::   ||.|     ||::.|.|      |:|....:..|.:...|.
Zfish    75 PSVYQPHAQPPVVGDYVQSWLLDSACGLPQTEPPTVNHNHAKSDTNETNDDGT------------ 127

  Fly   206 AGAGTAWNANCTISGAAAQTAAASSLHQASNHT-FYPWMAIAGECPEDPTKSKIRSDLT--QYGG 267
                                       :.|.|| ..|.:...|.|   .||::..|..|  :.|.
Zfish   128 ---------------------------EYSPHTILQPEVFTNGGC---STKTEAESSRTAEKSGD 162

  Fly   268 ISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHAL 332
            |....|......::     :||..:..|:: |..||::|.|||||||..|.||||.||.|:|..|
Zfish   163 IEGKPGADPENPVS-----NWLHASSTRKK-RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 221

  Fly   333 CLTERQIKIWFQNRRMKLKK 352
            .|||||:||||||||||:||
Zfish   222 NLTERQVKIWFQNRRMKMKK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	36/55 (65%)
hoxa9a	NP_571607.2	Hox9_act	1..171	CDD:461369	27/137 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	105..177		17/118 (14%)
		Homeodomain	185..241	CDD:459649	37/56 (66%)