Protein Alignment Ubx and hoxc11b

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_009298848.2
• Gene: hoxc11b / 570925
• ZFINID: ZDB-GENE-000822-3
• Length: 306
• Species: Danio rerio
• Alignment Length: 148
• Identity: 47/148 - (31%)
• Similarity: 73/148 - (49%)
• Gaps: 19/148 - (12%)

  Fly   206 AGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGIST 270
            :||......||...|::.:..:||.:......|......:  ||.::.|.          |...|
Zfish   162 SGADGGSEGNCLQKGSSGKPESASQVSSVLRSTADGEKEL--ECEKNTTS----------GSFET 214

  Fly   271 DMG-KRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 334
            ..| |..:::.:|.      .|....|:.|..||::|..|||:||..|.|:.:.:|::::..|.|
Zfish   215 SSGTKNDNQTKSGH------STTPRMRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRILNL 273

  Fly   335 TERQIKIWFQNRRMKLKK 352
            |:||:||||||||||.||
Zfish   274 TDRQVKIWFQNRRMKEKK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	28/55 (51%)
hoxc11b	XP_009298848.2	None