DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and meox2b

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_073787071.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:329 Species:Danio rerio


Alignment Length:195 Identity:58/195 - (29%)
Similarity:79/195 - (40%) Gaps:63/195 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 PDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQ 224
            ||:.......|..||.     |...||.:::|.:      .|||           :|.......|
Zfish   137 PDAAAPELCGTGAGSQ-----GMCAGNPTLTGSD------PSGV-----------SCVPGEYGRQ 179

  Fly   225 TAAASSLHQASNHTFYPWMAIAGECPEDPTK--SKIRSDLTQYGGISTDMGKRYSESLAGSLLPD 287
            ..:                      |.:|.:  ||.:||              .|:|..||...|
Zfish   180 NMS----------------------PVEPERRSSKGKSD--------------SSDSQDGSYKSD 208

  Fly   288 WLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
               .:...|:.|..:|:.|..|||.||..::||||.||.|:|..|.|||||:|:||||||||.|:
Zfish   209 ---VSSKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 270

  Fly   353  352
            Zfish   271  270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 32/55 (58%)
meox2bXP_073787071.1 None

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