DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and LOC5667563

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_001688391.3 Gene:LOC5667563 / 5667563 VectorBaseID:AGAMI1_004577 Length:456 Species:Anopheles gambiae


Alignment Length:427 Identity:105/427 - (24%)
Similarity:159/427 - (37%) Gaps:151/427 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YFEQASGFYGH----PHQATGMAMGS-GGHHDQ--------TASAAAAAYRGFPLSLGMSPYA-N 54
            :||:   .|||    ..:||....|| .|..|:        |.:.|:.     |.:|....:. :
Mosquito    45 FFER---LYGHLERDDKRATNNNNGSANGSSDEVRDRNVHVTVTKASD-----PCALIDETHRYH 101

  Fly    55 HHLQRTTQDSPYDASITAACNKIYGDGAGAYKQD-CLNIKADAVNGYKDIWNTGGSNGGGGGGGG 118
            ||...::.:|....|:.::.:      :|:.:.. .::|:.|:        :...|.|..|...|
Mosquito   102 HHDHNSSSNSQKSVSVNSSIS------SGSPRSSLAVDIEEDS--------SQDASIGSPGLQPG 152

  Fly   119 GGGGGA-----------GGTGGAGNA----------NGGNA----ANANGQNNPAGGMPV-RPSA 157
            ||....           |.|..:..|          .||..    |....|::.||.:|| .|..
Mosquito   153 GGDHPRQPPAYPPLRHYGITSSSSTACASEYPVPTTIGGQCYGFLAVTPQQSSSAGVLPVPAPHL 217

  Fly   158 CTP--DSRVGGYLDTSGGSPVSHRGGSAGGNVSVS---GGNGNAGGVQSGVGVAGAGTAWNANCT 217
            ..|  .:.|||         :.||  ...|:::||   ...|.|||       .|.|..      
Mosquito   218 TQPGDPALVGG---------LQHR--PQHGSMAVSTFFSSTGGAGG-------GGYGPP------ 258

  Fly   218 ISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAG 282
                                :|.|:..||.:.|:.|            .|:|..:.:|..:    
Mosquito   259 --------------------SFRPFFGIAHDGPQLP------------AGLSAFLARRRKK---- 287

  Fly   283 SLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 347
                     .|..||.|.|::..|||.||.|||.|.|::|.||.|:|..|.|:|.||||||||||
Mosquito   288 ---------EGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIKIWFQNRR 343

  Fly   348 MKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQG 384
            .|.|:..:|  ::::|.:            ..|||.|
Mosquito   344 AKDKRIEKA--QIDQQYR------------TFAAVNG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 33/55 (60%)
LOC5667563XP_001688391.3 None

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