Protein Alignment Ubx and nkx6.3

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001159612.1
• Gene: nkx6.3 / 558978
• ZFINID: ZDB-GENE-070810-7
• Length: 272
• Species: Danio rerio
• Alignment Length: 222
• Identity: 55/222 - (24%)
• Similarity: 82/222 - (36%)
• Gaps: 60/222 - (27%)

  Fly   139 ANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGV 203
            ||.|.|          ..|.||.    |..|....|.|     |..|..::..|..:.||.  |.
Zfish    41 ANINSQ----------LQAGTPH----GISDILSRSMV-----SGPGTPALLSGYPSMGGF--GT 84

  Fly   204 GVAGAGTAWNANCTISGAAA---QTAAASSLHQASNHTF----YPWMAIAGECPEDPTKSKIRSD 261
            .|...|..:|.:.|.||.:.   .....:.:...|:..:    |.|.....:|
Zfish    85 TVPSPGVYYNRDYTPSGLSTFPKPVVECAGMKGKSSSCWVDGGYEWRGARQQC------------ 137

  Fly   262 LTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 326
                   ..:||..          |:.:|.   ::..|.|::.:|...|||.|....||....|.
Zfish   138 -------GNNMGHN----------PENVGK---KKHTRPTFSGHQIFALEKTFEQTKYLAGPERA 182

  Fly   327 EMAHALCLTERQIKIWFQNRRMKLKKE 353
            .:|::|.:||.|:|:||||||.|.:|:
Zfish   183 RLAYSLGMTESQVKVWFQNRRTKWRKK 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)
nkx6.3	NP_001159612.1	Homeodomain	150..208	CDD:459649	23/60 (38%)