Protein Alignment Ubx and meox2a

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_017206696.1
• Gene: meox2a / 556898
• ZFINID: ZDB-GENE-080613-1
• Length: 302
• Species: Danio rerio
• Alignment Length: 323
• Identity: 85/323 - (26%)
• Similarity: 114/323 - (35%)
• Gaps: 135/323 - (41%)

  Fly   146 NPAGGMPVRPSACTPDSRVGGYLDTSGGSPVS---------HRGGSAGGN---VSVS-------- 190
            :||..:..||      ..:..|.|.|..||.|         ..||..||:   :|||
Zfish    20 HPAFALHGRP------EHLSSYPDLSSSSPPSTCIVSGYPGEDGGLFGGHQRGLSVSQQQHHHHH 78

  Fly   191 --------GG---------NGNAGGVQSGVGVA-----------------------GAGTAWNAN 215
                    ||         :.:|.||:.|:|::                       |||....|:
Zfish    79 HHHHLAQQGGWHLPQSSSASPSAAGVRLGLGISGPDSGSSDVGPGGPSLCASTPSLGAGVPSGAS 143

  Fly   216 CTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESL 280
            |...|            ....||..|..|       :...||.|||              .|||.
Zfish   144 CVPGG------------DFGRHTMSPAEA-------EKRNSKRRSD--------------SSESQ 175

  Fly   281 AGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 345
            .|:...|   .:...|:.|..:|:.|..|||.||..::||||.||.|:|..|.|||||:|:||||
Zfish   176 DGNYKSD---VSSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 237

  Fly   346 RRMKLK-------------KEIQAIKE--------------------LNEQEKQAQAQKAAAA 375
            ||||.|             ||:..:|:                    ||.::.|...|.:..|
Zfish   238 RRMKWKRVKGGQQGAVAREKELVNVKKGTLLPSEFSGIAGLHTPDSLLNNEDSQDSDQSSEHA 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	33/68 (49%)
meox2a	XP_017206696.1	Homeodomain	188..244	CDD:459649	32/55 (58%)