Protein Alignment Ubx and hoxb4

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001116487.1
• Gene: hoxb4 / 548393
• XenbaseID: XB-GENE-1033882
• Length: 234
• Species: Xenopus tropicalis
• Alignment Length: 212
• Identity: 71/212 - (33%)
• Similarity: 91/212 - (42%)
• Gaps: 53/212 - (25%)

  Fly   155 PSACTPDSRVGGYLDTS--GGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVA-GAGTAWNANC 216
            ||..:|:...|...::|  .|:|.|....|:....:     ...|.|:.|..:. .:|.......
 Frog    30 PSGHSPEYYGGQKRESSFQHGAPYSRSLSSSSAPYT-----SCQGSVRQGARLPHSSGLLPGEKA 89

  Fly   217 TISGAAAQTAAASSLHQASNH----------TFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTD 271
            .:..:...|:..|....||:|          ..||||
 Frog    90 HLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWM---------------------------- 126

  Fly   272 MGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 336
              |:...|.|.|...|     |..:|.|..|||.|.||||||||.|.|||||||:|:||.|.|:|
 Frog   127 --KKAHISRASSTYSD-----GEAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSE 184

  Fly   337 RQIKIWFQNRRMKLKKE 353
            |||||||||||||.||:
 Frog   185 RQIKIWFQNRRMKWKKD 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	41/55 (75%)
hoxb4	NP_001116487.1	Homeodomain	144..200	CDD:459649	41/55 (75%)