Protein Alignment Ubx and hoxa5

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001011405.1
• Gene: hoxa5 / 496880
• XenbaseID: XB-GENE-486061
• Length: 274
• Species: Xenopus tropicalis
• Alignment Length: 332
• Identity: 105/332 - (31%)
• Similarity: 132/332 - (39%)
• Gaps: 115/332 - (34%)

  Fly    78 YGDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANAN 142
            |||.:...:|            |:|..:...|..|            .|..|...:.|.:|:|..
 Frog    24 YGDHSSVNEQ------------YRDTTSMHSSRYG------------YGYNGMDLSVGRSASNHF 64

  Fly   143 GQNNPAGGMPVRPSACT---------------PDSRVGGYLDTSGGSPV--SHRGGS---AGGNV 187
            ..|:.|...|..||:.|               ||......:.|   |||  ||:||.   ...|.
 Frog    65 SANDRARNYPSNPSSSTEPRYNQPAASAHSPPPDPLPCTAVAT---SPVSDSHQGGKNSITNSNN 126

  Fly   188 SVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHT-----------FYP 241
            :.|..:.::.|..:.:...|.|.        |..|...|.||| .|||:..           .||
 Frog   127 TTSNSSNSSTGTSTHINRDGLGA--------SSGAEDDAPASS-DQASSQNSQSPAPSVQPQIYP 182

  Fly   242 WMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQ 306
            ||          .|..|..|         ::|                |..|  :|.|..|||||
 Frog   183 WM----------RKLHISHD---------NIG----------------GPEG--KRARTAYTRYQ 210

  Fly   307 TLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQK 371
            |||||||||.|.|||||||||:||||||:||||||||||||||.||           :.:.::..
 Frog   211 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK-----------DNKLKSMS 264

  Fly   372 AAAAAAA 378
            .|||..|
 Frog   265 MAAAGGA 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	46/55 (84%)
hoxa5	NP_001011405.1	Homeodomain	200..256	CDD:459649	46/55 (84%)