DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubx and dlx2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001008061.1 Gene:dlx2 / 493423 XenbaseID:XB-GENE-852891 Length:285 Species:Xenopus tropicalis


Alignment Length:153 Identity:37/153 - (24%)
Similarity:59/153 - (38%) Gaps:30/153 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 GAGTAWNA-------NCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQ 264
            |||:.:..       ...::|.:..|.:....:..|..::.|:.........||.|.....::..
 Frog    55 GAGSPYGQLGSYQFHGAALNGISYSTKSYDLTYSGSYSSYGPYGTSPSPPHNDPEKEDCEPEVRM 119

  Fly   265 YGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 329
            ..|....:                       |:.|..|:.:|...|::.|....||....|.|:|
 Frog   120 VNGKPKKV-----------------------RKPRTIYSSFQLAALQRRFQKTQYLALPERAELA 161

  Fly   330 HALCLTERQIKIWFQNRRMKLKK 352
            .:|.||:.|:||||||||.|.||
 Frog   162 ASLGLTQTQVKIWFQNRRSKFKK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
dlx2NP_001008061.1 DLL_N 29..107 CDD:463567 7/51 (14%)
Homeodomain 128..184 CDD:459649 24/55 (44%)

Return to query results.
Submit another query.