DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and LOC4576785

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_001231056.4 Gene:LOC4576785 / 4576785 VectorBaseID:AGAMI1_010630 Length:550 Species:Anopheles gambiae


Alignment Length:183 Identity:66/183 - (36%)
Similarity:85/183 - (46%) Gaps:48/183 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 AAQTAAASSLHQASNHTFYPWMAIAGECPE--DPTKSKIRSDLTQYGGISTDMGKRYSESLAGSL 284
            |.:|.|..|    :|.:|        ||.|  |.|.|      |...|.|:: |...::|..|| 
Mosquito   109 AVRTNATKS----NNMSF--------ECNEVIDSTLS------TNADGNSSN-GAFAADSYIGS- 153

  Fly   285 LPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK 349
                      .:|.|..:|..|.:|||||||:|.||.|.||||:...|.||||||||||||||||
Mosquito   154 ----------TKRSRTAFTSSQLVELEKEFHSNRYLCRPRRIELTRKLALTERQIKIWFQNRRMK 208

  Fly   350 LKKEIQAIKELN-----------EQEKQAQAQKAAAAAAAAAAVQG-----GH 386
            .|||...||.::           |..:..:....|:..:..|.:.|     ||
Mosquito   209 HKKESSNIKIISKIKSSCHCTDGESSRSPKISSPASPHSVQATIVGDDDHNGH 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 36/55 (65%)
LOC4576785XP_001231056.4 None

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