Protein Alignment Ubx and E5

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Alignment Length: 315
• Identity: 72/315 - (22%)
• Similarity: 101/315 - (32%)
• Gaps: 146/315 - (46%)

  Fly   140 NANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGG---SPVSHRGG--SAGGNVSVSGGNGNAGGV 199
            |.:|:..|.|.:..|    ..||     ||.|..   ||||....  :||||.:.:|....:|..
  Fly    90 NNSGRRTPRGYIYCR----RRDS-----LDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDP 145

  Fly   200 QSGVG-----------------VAGAGTAWNANCT-ISG-----------AAAQTAAASSL---H 232
            .||.|                 :.|..|:.||... ::|           .|||...|::|   |
  Fly   146 SSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHH 210

  Fly   233 QA----------------------------------------------SNHTF------------ 239
            |.                                              .:|.|
  Fly   211 QQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYP 275

  Fly   240 -YPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLL------PDWLGTNGLRRR 297
             |||:                  |:::|        |......|:.|      |         :|
  Fly   276 LYPWL------------------LSRHG--------RIFPRFPGNFLFQPFRKP---------KR 305

  Fly   298 GRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            .|..::..|.|:||..|..|||:....|.::|..|.|||.|:|:||||||.|.|:
  Fly   306 VRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	25/55 (45%)
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	25/55 (45%)