Protein Alignment Ubx and hoxc8a

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001005771.1
• Gene: hoxc8a / 449648
• ZFINID: ZDB-GENE-990415-114
• Length: 250
• Species: Danio rerio
• Alignment Length: 160
• Identity: 69/160 - (43%)
• Similarity: 93/160 - (58%)
• Gaps: 20/160 - (12%)

  Fly   239 FYPWMAIAGECPEDPT-KSKIRSDLTQY----GGISTDMGK---RYSESLAGSLLPDWLGTNGL- 294
            ||.:.|:    |..|. .::..:.|.||    ...||:.|:   ..|::.:.||:..|:..:..
Zfish    88 FYGYEAL----PRQPLYGTQQEATLAQYPDCKSSNSTNPGEGQGHLSQNSSPSLMFPWMRPHAPG 148

  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 359
            ||.|||||:|||||||||||..|.||||:||||::|||.|||||:||||||||||.|||
Zfish   149 RRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKE------ 207

  Fly   360 LNEQEKQAQAQKAAAAAAAAAAVQGGHLDQ 389
             |.::|....:..|.|.|.....:.|..::
Zfish   208 -NNKDKFPGQRGEAEAEAEEEGNEDGEAEE 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	44/55 (80%)
hoxc8a	NP_001005771.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	112..152		9/39 (23%)
		Antp-type hexapeptide. /evidence=ECO:0000255	138..143		1/4 (25%)
		Homeodomain	150..206	CDD:459649	44/55 (80%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..250		8/38 (21%)