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Protein Alignment Ubx and hoxc8
DIOPT Version :9
Sequence 1: | NP_536752.1 |
Gene: | Ubx / 42034 |
FlyBaseID: | FBgn0003944 |
Length: | 389 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001006787.1 |
Gene: | hoxc8 / 448482 |
XenbaseID: | XB-GENE-480999 |
Length: | 242 |
Species: | Xenopus tropicalis |
Alignment Length: | 172 |
Identity: | 70/172 - (40%) |
Similarity: | 97/172 - (56%) |
Gaps: | 34/172 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 224 QTAAASSLH-QASNHTFYPWMAIAGECPEDPTKS----KIRSDLTQY------GGISTDMGKRY- 276
|...|.:.| .||. ||.:.|: |.:| :..:.:.|| ...:|..|:.:
Frog 74 QNPCALTCHGDASK--FYGYEAL-------PRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHL 129
Fly 277 SESLAGSLLPDWLGTNGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 340
:::.:.||:..|:..:.. ||.|||||:|||||||||||..|.||||:||||::|||.|||||:|
Frog 130 NQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 194
Fly 341 IWFQNRRMKLKKEIQAIK------------ELNEQEKQAQAQ 370
|||||||||.|||....| |.||:|::.:.:
Frog 195 IWFQNRRMKWKKENNKDKLPGARDEEKTEEEGNEEEEKEEEE 236
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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