DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and emx1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:141 Identity:39/141 - (27%)
Similarity:62/141 - (43%) Gaps:43/141 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 FYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLL--------PDWLGTNGLR 295
            ||||:          .:::......|.|.:|.:           |||        |         
 Frog   101 FYPWV----------LRNRFFGHRFQGGDVSQE-----------SLLLHGPFARKP--------- 135

  Fly   296 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKEL 360
            :|.|..::..|.|.||:.|..|||:....|.::|.:|.|:|.|:|:||||||.|.|::     :|
 Frog   136 KRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKRQ-----KL 195

  Fly   361 NEQEKQAQAQK 371
            .|:...:..:|
 Frog   196 EEEGPDSDQKK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
emx1NP_001005459.1 Homeodomain 136..192 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 3/20 (15%)

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