DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and zfh1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:87 Identity:23/87 - (26%)
Similarity:38/87 - (43%) Gaps:13/87 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 NGLRR-RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ 355
            :|.|: |.|......|..:|::.:..|...:|.....:|..|.|..|.:::||||.|.:      
  Fly   695 SGERKVRVRTAINEEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSR------ 753

  Fly   356 AIKELNEQEKQAQAQKAAAAAA 377
                  |::.|:.....||.||
  Fly   754 ------ERKMQSFQNNQAAGAA 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 15/56 (27%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 16/66 (24%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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