DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and lbe

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:112 Identity:38/112 - (33%)
Similarity:54/112 - (48%) Gaps:24/112 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 359
            :|:.|..:|.:|..||||.|....||:...|.|:|.:|.|:..|:..||||||.|.|::|:.:|:
  Fly   353 KRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKK 417

  Fly   360 LNEQEKQAQAQKA------------------------AAAAAAAAAV 382
            ..:..|...|.|:                        |||||||..|
  Fly   418 DFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 24/55 (44%)

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